RNAscope Assay
Four flexible solutions for all your research needs
Independent of your genes of interest, our easy RNA in situ hybridization assay uses common reagents and protocols; providing universal assay conditions. All RNA-ISH kits contain reagents in a convenient ready-to-use (RTU) format, and chromogenic dyes are available to interrogate a single or two genes simultaneously. Most versatile are our RNAscope® Multiplex Fluorescent Reagent Kits, enabling you to interrogate 1, 2 or 3 genes simultaneously.
Automated RNAscope® ISH assays are also available for Leica Systems (LS) and Ventana Systems (VS).
Which RNAscope® Assay is right for me?
Use the table below to learn more about which RNA in situ hybridization product is right to your research needs.
| Assay Type | Chromogenic | Chromogenic | Chromogenic | Fluorescent | 
| Dye Used | Diaminobenzidine (DAB) | Fast Red | HRP Green & Fast Red | TSA-based Opal fluorophores | 
| RNAscope® Probes Channel Designation | Channel 1 | Channel 1 | Channel 1 & 2 | Channel 1-4 | 
| Multiplexing | Singleplex | Singleplex | Singleplex, Duplex | Single to Fourplex | 
| Key Benefit | Robust, sensitive, permanent stain. Most widely used RNAscope assay | Provides bright color stains with high contrast to background | Utilizes 2 different staining enzymes therefore avoiding any cross talk between the two stains | Utilizes up to 4 different spectral channels providing high flexibility | 
| Ideal for | First time user Routine applications | Studies of tissues with endogenous color background such as melanin in skin, liver, or lungs from smokers | Studies interrogating two RNA biomarkers simultaneously | Co-localization studies of up to 4 genes simultaneously Experimental application requiring flexibility | 
| Novel Gene or Unknown Expression | Compatible | Compatible | Compatible | Compatible | 
| Archival Specimens | Compatible | Compatible | Compatible | Compatible | 
| Microscope Imaging System | Standard bright field | Standard bright field Multispectral fluorescent imaging | Standard bright field | Multispectral fluorescent imaging | 
| Sample Type* | FFPE Tissues(TMAs) | FFPE Tissues(TMAs) | FFPE Tissues(TMAs) | FFPE Tissues(TMAs) | 
*Formalin-fixed, paraffin-embedded (FFPE), Tissue-Microarray (TMA)
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        a newchromogenic DNAin situhybridization (ISH)technology. DNAscope™ employs the proven “double-Z” probe design and signal amplification system of RNAscope™, enablingrapid and flexi...
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        Visualize a specific RNA locus at single cell sensitivity with spatial and morphological context The BaseScopeTM Assay is a unique product from ACD, based on the same platform of p...
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        Introducing the highly specific and sensitive miRNAscope™ Assay to detect small RNAs with spatial and morphological context at single-cell resolution. Leveraging ACD’s RNAscope™ co...
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        RNAscope™ Plus smRNA-RNA Assay Small regulatory RNAs, including miRNAs, are instrumental in regulating human health and have been associated with a wide range of differe...
 
         
         
                                                 
                     
                    




